Run CBS segmentation on normalized tumor signals

Run CBS segmentation on normalized tumor signals

Usage

run_cbs(tnorm_df, alpha = 0.005, min_width = 3, n_cores = 1)

Arguments

tnorm_df

Normalized tumor signal from run_tangent.

alpha

Passed to segment.

min_width

Passed to segment.

n_cores

Number of cores to use for parallel processing.

Value

A named list with the outputs of the CBS algorithm. Each element corresponds to a sample.